All Outputs (2)

Model annotation for synthetic biology: automating model to nucleotide sequence conversion. (2011)
Journal Article
Misirli, G., Hallinan, J. S., Yu, T., Lawson, J. R., Wimalaratne, S. M., Cooling, M. T., & Wipat, A. (2011). Model annotation for synthetic biology: automating model to nucleotide sequence conversion. Bioinformatics, 27(7), 973 - 979. https://doi.org/10.1093/bioinformatics/btr048

MOTIVATION: The need for the automated computational design of genetic circuits is becoming increasingly apparent with the advent of ever more complex and ambitious synthetic biology projects. Currently, most circuits are designed through the assembl... Read More about Model annotation for synthetic biology: automating model to nucleotide sequence conversion..

SBML Level 3 Package Proposal: Annotation (2011)
Report
Hucka, M., Laibe, C., Juty, N., Liebermeister, W., Keating, S., Lloyd, C., …Hoops, S. (in press). SBML Level 3 Package Proposal: Annotation. Nature Proceedings

The annotation of Systems Biology Markup Language (SBML) models with semantic terms has been supported for a number of years. The prevalence of such annotated models is growing, with repositories such as Biomodels.net and an increasing number of soft... Read More about SBML Level 3 Package Proposal: Annotation.