Tawny-SBOL: Using ontologies to design and constrain genetic circuits
(2017)
Presentation / Conference
Misirli. (2017, September). Tawny-SBOL: Using ontologies to design and constrain genetic circuits. Presented at International Conference on Biomedical Ontology 2017, Newcastle upon Tyne
Outputs (4)
Standard Enabled Model Generator for Genetic Circuit Design (2017)
Presentation / Conference
Myers, C., Wipat, A., Misirli, G., Nguyen, T., & McLaughlin, J. (2017, August). Standard Enabled Model Generator for Genetic Circuit Design. Presented at 9th International Workshop on Bio-Design Automation, Pittsburgh
A standard-enabled workflow for synthetic biology. (2017)
Journal Article
Mısırlı, G., Nguyen, T., Oberortner, E., Samineni, M., Wipat, A., Zhang, M., …Kuwahara, H. (2017). A standard-enabled workflow for synthetic biology. Transactions, 793 - 803. https://doi.org/10.1042/BST20160347A synthetic biology workflow is composed of data repositories that provide information about genetic parts, sequence-level design tools to compose these parts into circuits, visualization tools to depict these designs, genetic design tools to select... Read More about A standard-enabled workflow for synthetic biology..
Constructing Synthetic Biology Workflows in the Cloud (2017)
Journal Article
Misirli. (2017). Constructing Synthetic Biology Workflows in the Cloud. Engineering Biology, 61-65. https://doi.org/10.1049/enb.2017.0001The synthetic biology design process has traditionally been heavily dependent upon manual searching, acquisition and integration of existing biological data. A large amount of such data is already available from Internet-based resources, but data exc... Read More about Constructing Synthetic Biology Workflows in the Cloud.