Tissue volume estimation and age prediction using rapid structural brain scans

Hobday, Harriet; Cole, James H.; Stanyard, Ryan A.; Daws, Richard E.; Giampietro, Vincent; O’Daly, Owen; Leech, Robert; Váša, František

Abstract

The multicontrast EPImix sequence generates six contrasts, including a T1-weighted scan, in ~1 min. EPImix shows comparable diagnostic performance to conventional scans under qualitative clinical evaluation, and similarities in simple quantitative measures including contrast intensity. However, EPImix scans have not yet been compared to standard MRI scans using established quantitative measures. In this study, we compared conventional and EPImix-derived T1-weighted scans of 64 healthy participants using tissue volume estimates and predicted brain-age. All scans were pre-processed using the SPM12 DARTEL pipeline, generating measures of grey matter, white matter and cerebrospinal fluid volume. Brain-age was predicted using brainageR, a Gaussian Processes Regression model previously trained on a large sample of standard T1-weighted scans. Estimates of both global and voxel-wise tissue volume showed significantly similar results between standard and EPImix-derived T1-weighted scans. Brain-age estimates from both sequences were significantly correlated, although EPImix T1-weighted scans showed a systematic offset in predictions of chronological age. Supplementary analyses suggest that this is likely caused by the reduced field of view of EPImix scans, and the use of a brain-age model trained using conventional T1-weighted scans. However, this systematic error can be corrected using additional regression of T1-predicted brain-age onto EPImix-predicted brain-age. Finally, retest EPImix scans acquired for 10 participants demonstrated high test-retest reliability in all evaluated quantitative measurements. Quantitative analysis of EPImix scans has potential to reduce scanning time, increasing participant comfort and reducing cost, as well as to support automation of scanning, utilising active learning for faster and individually-tailored (neuro)imaging.

Citation

Hobday, H., Cole, J. H., Stanyard, R. A., Daws, R. E., Giampietro, V., O’Daly, O., …Váša, F. (in press). Tissue volume estimation and age prediction using rapid structural brain scans. Scientific reports, 12(1), Article 12005. https://doi.org/10.1038/s41598-022-14904-5

• Journal Article Type: Article
• Acceptance Date: Apr 1, 2022
• Online Publication Date: Jul 14, 2022
• Deposit Date: Oct 1, 2024
• Publicly Available Date: Oct 4, 2024
• Journal: Scientific Reports
• Print ISSN: 2045-2322
• Publisher: Nature Publishing Group
• Peer Reviewed: Peer Reviewed
• Volume: 12
• Issue: 1
• Article Number: 12005
• DOI: https://doi.org/10.1038/s41598-022-14904-5
• Public URL: https://keele-repository.worktribe.com/output/947468
• Publisher URL: https://www.nature.com/articles/s41598-022-14904-5
• Additional Information: Received: 1 April 2022; Accepted: 14 June 2022; First Online: 14 July 2022; : The authors declare no competing interests.